seq

package

v0.9.29 Latest Latest Go to latest Published: Apr 3, 2019 License: BSD-2-Clause Imports: 1 Imported by: 14

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Package contains interfaces for fasta & fastq & and multi packages

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type ReadFormater interface {
	Read() (*Seq, error)
	Format(*Seq, io.Writer) (int, error)
}

type ReadRewinder interface {
	Read() (*Seq, error)
	GetReadOffset() (int, error)
	SeekChunk(int64, bool) (int64, error)
	Rewind() error
}

type Reader interface {
	Read() (*Seq, error)
	GetReadOffset() (int, error)
	SeekChunk(int64, bool) (int64, error)
}

type Seq struct {
	ID   []byte
	Seq  []byte
	Qual []byte
}

func New(id []byte, seq []byte, qual []byte) *Seq